Research workbench
AlphaFold monomer V2.0 prediction for ribosomal protein S12 methylthiotransferase rimo (B4S8Z6)
Analyse AlphaFold monomer V2.0 prediction for ribosomal protein S12… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B4S8Z6
- Type
- protein
- Length
- 433 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf87a97E0A4bB354D834857B14296240B167cbe70
- Molecule
- Ribosomal protein S12 methylthiotransferase rimo
- UniProt
- B4S8Z6
- Pockets
- 3 · best druggability 0.77
Structure
1 distinct chain · 38% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal protein S12 methylthiotransferase rimo | protein | 433 | 38% helix, 23% strand | B4S8Z6 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 527 | 0.77 | 0.84 | 49 | empty |
| 2 | 149 | 0.50 | 0.79 | 24 | empty |
| 3 | 58 | 0.37 | 0.79 | 16 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B4S8Z6
- Elsewhere: UniProt B4S8Z6 · AlphaFold DB B4S8Z6
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