Research workbench
AlphaFold monomer V2.0 prediction for ribosomal protein S12 methylthiotransferase rimo (B7KDB6)
Analyse AlphaFold monomer V2.0 prediction for ribosomal protein S12… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B7KDB6
- Type
- protein
- Length
- 438 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBEc3AA10142B8a17933a4cBFcEC73dbF1D48a5ED
- Molecule
- Ribosomal protein S12 methylthiotransferase rimo
- UniProt
- B7KDB6
- Pockets
- 5 · best druggability 0.77
Structure
1 distinct chain · 37% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal protein S12 methylthiotransferase rimo | protein | 438 | 37% helix, 23% strand | B7KDB6 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 559 | 0.77 | 0.84 | 51 | empty |
| 2 | 91 | 0.36 | 0.75 | 15 | empty |
| 3 | 50 | 0.32 | 0.78 | 16 | empty |
| 4 | 52 | 0.31 | 0.76 | 13 | empty |
| 5 | 55 | 0.29 | 0.74 | 11 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B7KDB6
- Elsewhere: UniProt B7KDB6 · AlphaFold DB B7KDB6
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