Research workbench
AlphaFold monomer V2.0 prediction for ribosomal protein S12 methylthiotransferase rimo (B1WUD1)
Analyse AlphaFold monomer V2.0 prediction for ribosomal protein S12… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B1WUD1
- Type
- protein
- Length
- 437 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xA1f8bc17CB3611090dDAE0D139DbBDcb586eDf26
- Molecule
- Ribosomal protein S12 methylthiotransferase rimo
- UniProt
- B1WUD1
- Pockets
- 4 · best druggability 0.79
Structure
1 distinct chain · 38% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal protein S12 methylthiotransferase rimo | protein | 437 | 38% helix, 23% strand | B1WUD1 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 453 | 0.79 | 0.86 | 48 | empty |
| 2 | 64 | 0.35 | 0.77 | 18 | empty |
| 3 | 94 | 0.34 | 0.74 | 23 | empty |
| 4 | 52 | 0.34 | 0.79 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B1WUD1
- Elsewhere: UniProt B1WUD1 · AlphaFold DB B1WUD1
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