Research workbench
AlphaFold monomer V2.0 prediction for ribosomal protein S12 methylthiotransferase rimo (B4UKQ2)
Analyse AlphaFold monomer V2.0 prediction for ribosomal protein S12… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B4UKQ2
- Type
- protein
- Length
- 469 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x167C74E26f98Af17d629E9e0a9455d97c33EA927
- Molecule
- Ribosomal protein S12 methylthiotransferase rimo
- UniProt
- B4UKQ2
- Pockets
- 5 · best druggability 0.77
Structure
1 distinct chain · 33% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal protein S12 methylthiotransferase rimo | protein | 469 | 33% helix, 21% strand | B4UKQ2 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 583 | 0.77 | 0.83 | 67 | empty |
| 2 | 146 | 0.41 | 0.74 | 23 | empty |
| 3 | 94 | 0.36 | 0.75 | 19 | empty |
| 4 | 50 | 0.32 | 0.78 | 13 | empty |
| 5 | 59 | 0.29 | 0.74 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B4UKQ2
- Elsewhere: UniProt B4UKQ2 · AlphaFold DB B4UKQ2
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