Research workbench
AlphaFold monomer V2.0 prediction for ribosomal protein S12 methylthiotransferase rimo (B7I9V4)
Analyse AlphaFold monomer V2.0 prediction for ribosomal protein S12… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B7I9V4
- Type
- protein
- Length
- 447 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xc0F878C3f3E2a1874e2A6daC80d429e553DdB0D5
- Molecule
- Ribosomal protein S12 methylthiotransferase rimo
- UniProt
- B7I9V4
- Pockets
- 5 · best druggability 0.75
Structure
1 distinct chain · 36% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal protein S12 methylthiotransferase rimo | protein | 447 | 36% helix, 23% strand | B7I9V4 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 550 | 0.75 | 0.82 | 53 | empty |
| 2 | 233 | 0.55 | 0.77 | 28 | empty |
| 3 | 66 | 0.47 | 0.84 | 20 | empty |
| 4 | 77 | 0.38 | 0.78 | 17 | empty |
| 5 | 66 | 0.35 | 0.77 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B7I9V4
- Elsewhere: UniProt B7I9V4 · AlphaFold DB B7I9V4
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