Research workbench
AlphaFold monomer V2.0 prediction for ribosomal protein S12 methylthiotransferase rimo (A3DDZ7)
Analyse AlphaFold monomer V2.0 prediction for ribosomal protein S12… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A3DDZ7
- Type
- protein
- Length
- 453 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5f589287314FcB5B87F1F71E7db97a0D3F14CeaE
- Molecule
- Ribosomal protein S12 methylthiotransferase rimo
- UniProt
- A3DDZ7
- Pockets
- 5 · best druggability 0.77
Structure
1 distinct chain · 38% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosomal protein S12 methylthiotransferase rimo | protein | 453 | 38% helix, 22% strand | A3DDZ7 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 537 | 0.77 | 0.84 | 53 | empty |
| 2 | 102 | 0.42 | 0.77 | 17 | empty |
| 3 | 94 | 0.39 | 0.77 | 19 | empty |
| 4 | 56 | 0.35 | 0.78 | 15 | empty |
| 5 | 52 | 0.27 | 0.74 | 11 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A3DDZ7
- Elsewhere: UniProt A3DDZ7 · AlphaFold DB A3DDZ7
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