Research workbench
AlphaFold monomer V2.0 prediction for pyrimidine-specific ribonucleoside hydrolase riha (P41409)
Analyse AlphaFold monomer V2.0 prediction for pyrimidine-specific ribonucleoside… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P41409
- Type
- protein
- Length
- 311 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x8873c1b38A148297C06f7797E3A5aBaef6A3Feba
- Molecule
- Pyrimidine-specific ribonucleoside hydrolase riha
- UniProt
- P41409
- Pockets
- 1 · best druggability 0.76
Structure
1 distinct chain · 41% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Pyrimidine-specific ribonucleoside hydrolase riha | protein | 311 | 41% helix, 19% strand | P41409 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 99 | 0.76 | 0.96 | 24 | empty |
Compared structures
- 3G5I · Crystal Structure of the E.coli RihA pyrimidine nucleosidase bound to a… · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 3G5I · Crystal structure of the E.COLI riha pyrimidine nucleosidase bound to a… · an experimental structure of the same protein · chain A against A, TM-score 0.98
- 1YOE · Crystal structure of a the E. COLI pyrimidine nucleoside hydrolase ybek with bound ribose · an experimental structure of the same protein · chain A against A, TM-score 0.96
- 1YOE · Crystal structure of a the E. coli pyrimidine nucleoside hydrolase YbeK with bound ribose · an experimental structure of the same protein · chain A against A, TM-score 0.96
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P41409
- Elsewhere: UniProt P41409 · AlphaFold DB P41409
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