Research workbench
AlphaFold monomer V2.0 prediction for synembryn-B (Q6DRJ9)
Analyse AlphaFold monomer V2.0 prediction for synembryn-B (Q6DRJ9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6DRJ9
- Type
- protein
- Length
- 536 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB44F19a0cb161828322eEEd13F55d4C3C34938d2
- Molecule
- Synembryn-B
- UniProt
- Q6DRJ9
- Pockets
- 7 · best druggability 0.61
Structure
1 distinct chain · 63% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Synembryn-B | protein | 536 | 63% helix, 3% strand | Q6DRJ9 |
Pockets
7 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 53 | 0.61 | 0.92 | 15 | empty |
| 2 | 195 | 0.50 | 0.77 | 31 | empty |
| 3 | 92 | 0.47 | 0.81 | 19 | empty |
| 4 | 155 | 0.43 | 0.75 | 23 | empty |
| 5 | 61 | 0.34 | 0.77 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6DRJ9
- Elsewhere: UniProt Q6DRJ9 · AlphaFold DB Q6DRJ9
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