Research workbench
AlphaFold monomer V2.0 prediction for riboflavin biosynthesis protein ribd (Q89AB0)
Analyse AlphaFold monomer V2.0 prediction for riboflavin biosynthesis protein ribd… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q89AB0
- Type
- protein
- Length
- 372 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x4Ef77Afb5a3D9F41c95Be3227D1CC986CCb61835
- Molecule
- Riboflavin biosynthesis protein ribd
- UniProt
- Q89AB0
- Pockets
- 5 · best druggability 0.78
Structure
1 distinct chain · 28% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Riboflavin biosynthesis protein ribd | protein | 372 | 28% helix, 24% strand | Q89AB0 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 576 | 0.78 | 0.84 | 61 | empty |
| 2 | 321 | 0.63 | 0.79 | 40 | empty |
| 3 | 164 | 0.53 | 0.80 | 31 | empty |
| 4 | 74 | 0.32 | 0.73 | 18 | empty |
| 5 | 51 | 0.31 | 0.76 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q89AB0
- Elsewhere: UniProt Q89AB0 · AlphaFold DB Q89AB0
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