Research workbench
AlphaFold monomer V2.0 prediction for 2-keto-3-deoxy-L-rhamnonate aldolase (C0Q079)
Analyse AlphaFold monomer V2.0 prediction for 2-keto-3-deoxy-L-rhamnonate aldolase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- C0Q079
- Type
- protein
- Length
- 267 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6caDF58687FA86EEd5943cD410b8F963d69C56Dd
- Molecule
- 2-keto-3-deoxy-L-rhamnonate aldolase
- UniProt
- C0Q079
- Pockets
- 3 · best druggability 0.53
Structure
1 distinct chain · 43% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | 2-keto-3-deoxy-L-rhamnonate aldolase | protein | 267 | 43% helix, 15% strand | C0Q079 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 148 | 0.53 | 0.80 | 23 | empty |
| 2 | 143 | 0.45 | 0.76 | 21 | empty |
| 3 | 56 | 0.31 | 0.76 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C0Q079
- Elsewhere: UniProt C0Q079 · AlphaFold DB C0Q079
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