Research workbench
AlphaFold monomer V2.0 prediction for ATP-dependent RNA helicase rhlb (Q8P4D4)
Analyse AlphaFold monomer V2.0 prediction for ATP-dependent RNA helicase rhlb (Q8P4D4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8P4D4
- Type
- protein
- Length
- 573 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6DAA77C4263E74E745cA9c4D8E291e57e8991Cf5
- Molecule
- ATP-dependent RNA helicase rhlb
- UniProt
- Q8P4D4
- Pockets
- 6 · best druggability 0.73
Structure
1 distinct chain · 32% helix, 11% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | ATP-dependent RNA helicase rhlb | protein | 573 | 32% helix, 11% strand | Q8P4D4 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 494 | 0.73 | 0.82 | 39 | empty |
| 2 | 309 | 0.66 | 0.81 | 44 | empty |
| 3 | 185 | 0.44 | 0.74 | 28 | empty |
| 4 | 123 | 0.37 | 0.73 | 13 | empty |
| 5 | 75 | 0.36 | 0.77 | 16 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8P4D4
- Elsewhere: UniProt Q8P4D4 · AlphaFold DB Q8P4D4
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