Research workbench
AlphaFold monomer V2.0 prediction for probable rhamnogalacturonase C (B8NGP8)
Analyse AlphaFold monomer V2.0 prediction for probable rhamnogalacturonase C (B8NGP8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B8NGP8
- Type
- protein
- Length
- 447 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x69fc39B8A7390Db29e02023019DFaf30fc148a69
- Molecule
- Probable rhamnogalacturonase C
- UniProt
- B8NGP8
- Pockets
- 1 · best druggability 0.36
Structure
1 distinct chain · 7% helix, 47% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable rhamnogalacturonase C | protein | 447 | 7% helix, 47% strand | B8NGP8 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 85 | 0.36 | 0.76 | 23 | empty |
Modifications
Observed in the structure: 4 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B8NGP8
- Elsewhere: UniProt B8NGP8 · AlphaFold DB B8NGP8
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