Research workbench
AlphaFold monomer V2.0 prediction for inactive rhomboid protein 1 (Q499S9)
Analyse AlphaFold monomer V2.0 prediction for inactive rhomboid protein 1 (Q499S9) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q499S9
- Type
- protein
- Length
- 856 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7012c0b45c68a2c067644b9d3e5DDa06892c6957
- Molecule
- Inactive rhomboid protein 1
- UniProt
- Q499S9
- Pockets
- 8 · best druggability 0.75
Structure
1 distinct chain · 33% helix, 7% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Inactive rhomboid protein 1 | protein | 856 | 33% helix, 7% strand | Q499S9 |
Pockets
8 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 118 | 0.75 | 0.95 | 29 | empty |
| 2 | 339 | 0.73 | 0.85 | 36 | empty |
| 3 | 118 | 0.72 | 0.93 | 22 | empty |
| 4 | 862 | 0.72 | 0.77 | 63 | empty |
| 5 | 281 | 0.65 | 0.81 | 41 | empty |
Modifications
Observed in the structure: 10 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q499S9
- Elsewhere: UniProt Q499S9 · AlphaFold DB Q499S9
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