Research workbench
AlphaFold monomer V2.0 prediction for rhomboid-like protease 5 (Q6GV23)
Analyse AlphaFold monomer V2.0 prediction for rhomboid-like protease 5 (Q6GV23) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6GV23
- Type
- protein
- Length
- 841 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x79a905d858Ce72991FD6E7a9C6498620f42E146D
- Molecule
- Rhomboid-like protease 5
- UniProt
- Q6GV23
- Pockets
- 8 · best druggability 0.79
Structure
1 distinct chain · 39% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Rhomboid-like protease 5 | protein | 841 | 39% helix, 3% strand | Q6GV23 |
Pockets
8 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1002 | 0.79 | 0.81 | 119 | empty |
| 2 | 179 | 0.68 | 0.86 | 30 | empty |
| 3 | 601 | 0.67 | 0.77 | 57 | empty |
| 4 | 343 | 0.57 | 0.76 | 32 | empty |
| 5 | 435 | 0.57 | 0.73 | 51 | empty |
Modifications
Observed in the structure: 5 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6GV23
- Elsewhere: UniProt Q6GV23 · AlphaFold DB Q6GV23
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