Research workbench
AlphaFold monomer V2.0 prediction for rhomboid domain-containing protein 3 (Q9Y3P4)
Analyse AlphaFold monomer V2.0 prediction for rhomboid domain-containing protein 3… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9Y3P4
- Type
- protein
- Length
- 386 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x02ba1297E099E2bE241b90eF8A279dBA8073B098
- Molecule
- Rhomboid domain-containing protein 3
- UniProt
- Q9Y3P4
- Pockets
- 5 · best druggability 0.47
Structure
1 distinct chain · 49% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Rhomboid domain-containing protein 3 | protein | 386 | 49% helix, 2% strand | Q9Y3P4 |
Pockets
5 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 193 | 0.47 | 0.75 | 24 | empty |
| 2 | 70 | 0.44 | 0.82 | 18 | empty |
| 3 | 85 | 0.41 | 0.77 | 21 | empty |
| 4 | 109 | 0.36 | 0.73 | 21 | empty |
| 5 | 75 | 0.30 | 0.73 | 18 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Y3P4
- Elsewhere: UniProt Q9Y3P4 · AlphaFold DB Q9Y3P4
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