Research workbench
AlphaFold monomer V2.0 prediction for rhomboid domain-containing protein 2 (Q6NTF9)
Analyse AlphaFold monomer V2.0 prediction for rhomboid domain-containing protein 2… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6NTF9
- Type
- protein
- Length
- 364 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf8D5B1BD340FcF603A2a7d91f06AE411632c4809
- Molecule
- Rhomboid domain-containing protein 2
- UniProt
- Q6NTF9
- Pockets
- 5 · best druggability 0.39
Structure
1 distinct chain · 41% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Rhomboid domain-containing protein 2 | protein | 364 | 41% helix, 3% strand | Q6NTF9 |
Pockets
5 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 53 | 0.39 | 0.80 | 13 | empty |
| 2 | 83 | 0.38 | 0.77 | 15 | empty |
| 3 | 94 | 0.36 | 0.74 | 16 | empty |
| 4 | 99 | 0.35 | 0.74 | 19 | empty |
| 5 | 76 | 0.28 | 0.72 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6NTF9
- Elsewhere: UniProt Q6NTF9 · AlphaFold DB Q6NTF9
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