Research workbench
AlphaFold monomer V2.0 prediction for rhamnulokinase (Q5PKG3)
Analyse AlphaFold monomer V2.0 prediction for rhamnulokinase (Q5PKG3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5PKG3
- Type
- protein
- Length
- 489 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xed981C7Bde83976797b0E4fB64b4974D133Bd529
- Molecule
- Rhamnulokinase
- UniProt
- Q5PKG3
- Pockets
- 4 · best druggability 0.74
Structure
1 distinct chain · 42% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Rhamnulokinase | protein | 489 | 42% helix, 22% strand | Q5PKG3 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 504 | 0.74 | 0.82 | 63 | empty |
| 2 | 724 | 0.71 | 0.78 | 70 | empty |
| 3 | 102 | 0.40 | 0.76 | 18 | empty |
| 4 | 61 | 0.32 | 0.76 | 15 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5PKG3
- Elsewhere: UniProt Q5PKG3 · AlphaFold DB Q5PKG3
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