Research workbench
AlphaFold monomer V2.0 prediction for rhamnulokinase (B5QWY3)
Analyse AlphaFold monomer V2.0 prediction for rhamnulokinase (B5QWY3) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B5QWY3
- Type
- protein
- Length
- 489 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb3c0C983Fc44934AC589D7131C08a72544EBB92E
- Molecule
- Rhamnulokinase
- UniProt
- B5QWY3
- Pockets
- 4 · best druggability 0.74
Structure
1 distinct chain · 42% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Rhamnulokinase | protein | 489 | 42% helix, 22% strand | B5QWY3 |
Pockets
4 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 521 | 0.74 | 0.82 | 64 | empty |
| 2 | 582 | 0.64 | 0.75 | 66 | empty |
| 3 | 89 | 0.37 | 0.76 | 18 | empty |
| 4 | 54 | 0.29 | 0.75 | 14 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B5QWY3
- Elsewhere: UniProt B5QWY3 · AlphaFold DB B5QWY3
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