Research workbench
AlphaFold monomer V2.0 prediction for rhamnulokinase (Q6DA23)
Analyse AlphaFold monomer V2.0 prediction for rhamnulokinase (Q6DA23) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q6DA23
- Type
- protein
- Length
- 496 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3E00F62D3140A99ec52E6a60794edd4CcC68D67b
- Molecule
- Rhamnulokinase
- UniProt
- Q6DA23
- Pockets
- 6 · best druggability 0.73
Structure
1 distinct chain · 40% helix, 22% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Rhamnulokinase | protein | 496 | 40% helix, 22% strand | Q6DA23 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 370 | 0.73 | 0.84 | 48 | empty |
| 2 | 302 | 0.59 | 0.78 | 31 | empty |
| 3 | 80 | 0.39 | 0.78 | 16 | empty |
| 4 | 107 | 0.39 | 0.76 | 16 | empty |
| 5 | 64 | 0.38 | 0.79 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q6DA23
- Elsewhere: UniProt Q6DA23 · AlphaFold DB Q6DA23
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