Research workbench
AlphaFold monomer V2.0 prediction for rhamnulokinase (Q1R415)
Analyse AlphaFold monomer V2.0 prediction for rhamnulokinase (Q1R415) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q1R415
- Type
- protein
- Length
- 489 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3c6e3C70425C7a2f06b2cebf5636635003E01d5F
- Molecule
- Rhamnulokinase
- UniProt
- Q1R415
- Pockets
- 5 · best druggability 0.74
Structure
1 distinct chain · 43% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Rhamnulokinase | protein | 489 | 43% helix, 21% strand | Q1R415 |
Pockets
5 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 455 | 0.74 | 0.83 | 58 | empty |
| 2 | 119 | 0.42 | 0.76 | 23 | empty |
| 3 | 76 | 0.40 | 0.79 | 20 | empty |
| 4 | 50 | 0.30 | 0.76 | 13 | empty |
| 5 | 51 | 0.29 | 0.75 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q1R415
- Elsewhere: UniProt Q1R415 · AlphaFold DB Q1R415
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