Research workbench
AlphaFold monomer V2.0 prediction for L-rhamnose isomerase (B5YZ40)
Analyse AlphaFold monomer V2.0 prediction for L-rhamnose isomerase (B5YZ40) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B5YZ40
- Type
- protein
- Length
- 419 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xD46DA32B7720c71602C83cB010B3A9c4840f5D93
- Molecule
- L-rhamnose isomerase
- UniProt
- B5YZ40
- Pockets
- 5 · best druggability 0.49
Structure
1 distinct chain · 47% helix, 12% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | L-rhamnose isomerase | protein | 419 | 47% helix, 12% strand | B5YZ40 |
Pockets
5 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 107 | 0.49 | 0.80 | 17 | empty |
| 2 | 84 | 0.39 | 0.78 | 21 | empty |
| 3 | 93 | 0.39 | 0.77 | 21 | empty |
| 4 | 78 | 0.34 | 0.75 | 16 | empty |
| 5 | 69 | 0.30 | 0.74 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B5YZ40
- Elsewhere: UniProt B5YZ40 · AlphaFold DB B5YZ40
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