Research workbench
AlphaFold monomer V2.0 prediction for reverse gyrase 1 (Q9YCB6)
Analyse AlphaFold monomer V2.0 prediction for reverse gyrase 1 (Q9YCB6) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9YCB6
- Type
- protein
- Length
- 1,370 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9F605311B7e26e76340423EfAfbE5e2EFc7A0b7C
- Molecule
- Reverse gyrase 1
- UniProt
- Q9YCB6
- Pockets
- 15 · best druggability 0.80
Structure
1 distinct chain · 47% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Reverse gyrase 1 | protein | 1370 | 47% helix, 17% strand | Q9YCB6 |
Pockets
15 pockets found on a 1 Å grid, 9 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 928 | 0.80 | 0.82 | 90 | empty |
| 2 | 1041 | 0.80 | 0.81 | 91 | empty |
| 3 | 686 | 0.71 | 0.78 | 78 | empty |
| 4 | 371 | 0.65 | 0.79 | 44 | empty |
| 5 | 498 | 0.63 | 0.76 | 49 | empty |
Modifications
Observed in the structure: 3 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9YCB6
- Elsewhere: UniProt Q9YCB6 · AlphaFold DB Q9YCB6
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