Research workbench
AlphaFold monomer V2.0 prediction for RANBP2-like and grip domain- containing protein 1 (P0DJD0)
Analyse AlphaFold monomer V2.0 prediction for RANBP2-like and grip domain- containing… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P0DJD0
- Type
- protein
- Length
- 1,748 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xa73BAb1DabE4333A884D03393eAa10c3B4215494
- Molecule
- RANBP2-like and grip domain-containing protein 1
- UniProt
- P0DJD0
- Pockets
- 13 · best druggability 0.70
Structure
1 distinct chain · 42% helix, 7% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RANBP2-like and grip domain-containing protein 1 | protein | 1748 | 42% helix, 7% strand | P0DJD0 |
Pockets
13 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 722 | 0.70 | 0.77 | 75 | empty |
| 2 | 445 | 0.60 | 0.75 | 56 | empty |
| 3 | 133 | 0.56 | 0.82 | 25 | empty |
| 4 | 129 | 0.50 | 0.80 | 20 | empty |
| 5 | 174 | 0.47 | 0.76 | 33 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0DJD0
- Elsewhere: UniProt P0DJD0 · AlphaFold DB P0DJD0
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