Research workbench
AlphaFold monomer V2.0 prediction for DNA-binding protein RFX8 (D3YU81)
Analyse AlphaFold monomer V2.0 prediction for DNA-binding protein RFX8 (D3YU81) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- D3YU81
- Type
- protein
- Length
- 596 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x3103931037B3C500a07b6CD5CC2934Cfc0d5Caa7
- Molecule
- DNA-binding protein RFX8
- UniProt
- D3YU81
- Pockets
- 7 · best druggability 0.72
Structure
1 distinct chain · 50% helix, 10% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DNA-binding protein RFX8 | protein | 596 | 50% helix, 10% strand | D3YU81 |
Pockets
7 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1164 | 0.72 | 0.76 | 98 | empty |
| 2 | 276 | 0.52 | 0.75 | 31 | empty |
| 3 | 233 | 0.50 | 0.75 | 26 | empty |
| 4 | 111 | 0.43 | 0.78 | 17 | empty |
| 5 | 132 | 0.41 | 0.75 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D3YU81
- Elsewhere: UniProt D3YU81 · AlphaFold DB D3YU81
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.