Research workbench
AlphaFold monomer V2.0 prediction for rfx-like DNA-binding protein RFX1 (P48743)
Analyse AlphaFold monomer V2.0 prediction for rfx-like DNA-binding protein RFX1 (P48743) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P48743
- Type
- protein
- Length
- 811 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xBF0D2e107Ce1EcD2C4369B042274201DB719AaAF
- Molecule
- Rfx-like DNA-binding protein RFX1
- UniProt
- P48743
- Pockets
- 6 · best druggability 0.78
Structure
1 distinct chain · 43% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Rfx-like DNA-binding protein RFX1 | protein | 811 | 43% helix, 3% strand | P48743 |
Pockets
6 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 88 | 0.78 | 0.99 | 17 | empty |
| 2 | 692 | 0.78 | 0.83 | 67 | empty |
| 3 | 54 | 0.70 | 0.97 | 20 | empty |
| 4 | 716 | 0.67 | 0.75 | 53 | empty |
| 5 | 119 | 0.44 | 0.77 | 17 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P48743
- Elsewhere: UniProt P48743 · AlphaFold DB P48743
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