Research workbench
AlphaFold monomer V2.0 prediction for protein RFT1 homolog (Q0D2E8)
Analyse AlphaFold monomer V2.0 prediction for protein RFT1 homolog (Q0D2E8) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q0D2E8
- Type
- protein
- Length
- 539 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x65Aa444c599a2FAFaA573437756707F24918A5Fe
- Molecule
- Protein RFT1 homolog
- UniProt
- Q0D2E8
- Pockets
- 9 · best druggability 0.72
Structure
1 distinct chain · 82% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein RFT1 homolog | protein | 539 | 82% helix, 0% strand | Q0D2E8 |
Pockets
9 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 710 | 0.72 | 0.78 | 55 | empty |
| 2 | 489 | 0.61 | 0.75 | 37 | empty |
| 3 | 297 | 0.55 | 0.75 | 23 | empty |
| 4 | 98 | 0.41 | 0.76 | 18 | empty |
| 5 | 85 | 0.38 | 0.76 | 16 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0D2E8
- Elsewhere: UniProt Q0D2E8 · AlphaFold DB Q0D2E8
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