Research workbench
AlphaFold monomer V2.0 prediction for replication factor C large subunit (Q46AT6)
Analyse AlphaFold monomer V2.0 prediction for replication factor C large subunit… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q46AT6
- Type
- protein
- Length
- 642 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf7D20b3d2f8DB1892d5C3e88dC1a669134D3Ad32
- Molecule
- Replication factor C large subunit
- UniProt
- Q46AT6
- Pockets
- 5 · best druggability 0.64
Structure
1 distinct chain · 41% helix, 5% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Replication factor C large subunit | protein | 642 | 41% helix, 5% strand | Q46AT6 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 201 | 0.64 | 0.83 | 34 | empty |
| 2 | 361 | 0.57 | 0.75 | 31 | empty |
| 3 | 112 | 0.39 | 0.75 | 19 | empty |
| 4 | 61 | 0.38 | 0.80 | 13 | empty |
| 5 | 87 | 0.32 | 0.73 | 15 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q46AT6
- Elsewhere: UniProt Q46AT6 · AlphaFold DB Q46AT6
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