Research workbench
AlphaFold monomer V2.0 prediction for O-antigen export system permease protein rfba (Q48478)
Analyse AlphaFold monomer V2.0 prediction for O-antigen export system permease protein… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q48478
- Type
- protein
- Length
- 259 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5c4adF1416281C09AE8eE1cbb80fF7e44cE86F97
- Molecule
- O-antigen export system permease protein rfba
- UniProt
- Q48478
- Pockets
- 6 · best druggability 0.50
Structure
1 distinct chain · 78% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | O-antigen export system permease protein rfba | protein | 259 | 78% helix, 0% strand | Q48478 |
Pockets
6 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 88 | 0.50 | 0.83 | 16 | empty |
| 2 | 91 | 0.38 | 0.75 | 15 | empty |
| 3 | 81 | 0.35 | 0.75 | 15 | empty |
| 4 | 81 | 0.34 | 0.75 | 13 | empty |
| 5 | 52 | 0.29 | 0.75 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q48478
- Elsewhere: UniProt Q48478 · AlphaFold DB Q48478
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