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AlphaFold monomer V2.0 prediction for lipopolysaccharide core HEPTOSE(I) kinase rfap (Q9HUF7)

Analyse AlphaFold monomer V2.0 prediction for lipopolysaccharide core HEPTOSE(I) kinase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q9HUF7
Type: protein
Length: 268 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0xc0F878C3f3E2a1874e2A6daC80d429e553DdB0D5
Molecule: Lipopolysaccharide core HEPTOSE(I) kinase rfap
UniProt: Q9HUF7
Pockets: 4 · best druggability 0.76

Structure

1 distinct chain · 43% helix, 21% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Lipopolysaccharide core HEPTOSE(I) kinase rfap	protein	268	43% helix, 21% strand	Q9HUF7

Pockets

4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	190	0.76	0.91	30	empty
2	167	0.49	0.77	19	empty
3	138	0.44	0.76	19	empty
4	60	0.28	0.73	12	empty

Compared structures

6DFL · Waap in complex with acyl carrier protein · an experimental structure of the same protein · chain A against A, TM-score 0.88
6DFL · WaaP in complex with acyl carrier protein · an experimental structure of the same protein · chain A against A, TM-score 0.88

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9HUF7
Elsewhere: UniProt Q9HUF7 · AlphaFold DB Q9HUF7

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