Research workbench
AlphaFold monomer V2.0 prediction for lipopolysaccharide core HEPTOSE(I) kinase rfap (P25741)
Analyse AlphaFold monomer V2.0 prediction for lipopolysaccharide core HEPTOSE(I) kinase… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- P25741
- Type
- protein
- Length
- 265 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x01e3c8dae821844D1746b8af2984AbeaEaFbE719
- Molecule
- Lipopolysaccharide core HEPTOSE(I) kinase rfap
- UniProt
- P25741
- Pockets
- 5 · best druggability 0.75
Structure
1 distinct chain · 45% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Lipopolysaccharide core HEPTOSE(I) kinase rfap | protein | 265 | 45% helix, 21% strand | P25741 |
Pockets
5 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 166 | 0.75 | 0.91 | 28 | empty |
| 2 | 183 | 0.54 | 0.79 | 22 | empty |
| 3 | 211 | 0.50 | 0.76 | 19 | empty |
| 4 | 206 | 0.49 | 0.75 | 24 | empty |
| 5 | 52 | 0.26 | 0.73 | 10 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P25741
- Elsewhere: UniProt P25741 · AlphaFold DB P25741
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