Research workbench
AlphaFold monomer V2.0 prediction for replication protein a 70 kda DNA-binding subunit B (Q9SD82)
Analyse AlphaFold monomer V2.0 prediction for replication protein a 70 kda DNA-binding… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9SD82
- Type
- protein
- Length
- 604 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xdF2b063d4B94F3f46D117B1af99A846bD4a59284
- Molecule
- Replication protein a 70 kda DNA-binding subunit B
- UniProt
- Q9SD82
- Pockets
- 6 · best druggability 0.63
Structure
1 distinct chain · 19% helix, 36% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Replication protein a 70 kda DNA-binding subunit B | protein | 604 | 19% helix, 36% strand | Q9SD82 |
Pockets
6 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 410 | 0.63 | 0.77 | 54 | empty |
| 2 | 303 | 0.53 | 0.75 | 38 | empty |
| 3 | 66 | 0.29 | 0.74 | 15 | empty |
| 4 | 66 | 0.29 | 0.74 | 17 | empty |
| 5 | 64 | 0.29 | 0.74 | 19 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9SD82
- Elsewhere: UniProt Q9SD82 · AlphaFold DB Q9SD82
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