Research workbench
AlphaFold monomer V2.0 prediction for rab escort protein 1 (Q8LLD4)
Analyse AlphaFold monomer V2.0 prediction for rab escort protein 1 (Q8LLD4) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8LLD4
- Type
- protein
- Length
- 563 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7a1388B6Aad67B04634A32f63b8A6D6005eab86c
- Molecule
- Rab escort protein 1
- UniProt
- Q8LLD4
- Pockets
- 8 · best druggability 0.55
Structure
1 distinct chain · 31% helix, 23% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Rab escort protein 1 | protein | 563 | 31% helix, 23% strand | Q8LLD4 |
Pockets
8 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 221 | 0.55 | 0.78 | 28 | empty |
| 2 | 125 | 0.53 | 0.82 | 22 | empty |
| 3 | 89 | 0.43 | 0.79 | 15 | empty |
| 4 | 100 | 0.41 | 0.77 | 25 | empty |
| 5 | 76 | 0.38 | 0.78 | 21 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8LLD4
- Elsewhere: UniProt Q8LLD4 · AlphaFold DB Q8LLD4
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