Research workbench

AlphaFold monomer V2.0 prediction for protein reca (P42443)

Analyse AlphaFold monomer V2.0 prediction for protein reca (P42443) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: P42443
Type: protein
Length: 363 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x40B9C9d5F084D34d026E9d5Dd10501AcdF6d6152
Molecule: Protein reca
UniProt: P42443
Pockets: 4 · best druggability 0.37

Structure

1 distinct chain · 37% helix, 23% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Protein reca	protein	363	37% helix, 23% strand	P42443

Pockets

4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	99	0.37	0.75	22	empty
2	57	0.33	0.77	18	empty
3	53	0.26	0.73	11	empty
4	51	0.25	0.72	10	empty

Compared structures

1XP8 · Deinococcus radiodurans RecA in complex with ATP-gamma-S · an experimental structure of the same protein · chain A against A, TM-score 0.66
1XP8 · Deinococcus radiodurans reca in complex with ATP-gamma-S · an experimental structure of the same protein · chain A against A, TM-score 0.66

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P42443
Elsewhere: UniProt P42443 · AlphaFold DB P42443

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