Research workbench
AlphaFold monomer V2.0 prediction for retinoblastoma-related protein 1 (A2YXJ7)
Analyse AlphaFold monomer V2.0 prediction for retinoblastoma-related protein 1 (A2YXJ7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A2YXJ7
- Type
- protein
- Length
- 1,010 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x6D71747Ba3BA61acAd0bA28226C08437a119C1D7
- Molecule
- Retinoblastoma-related protein 1
- UniProt
- A2YXJ7
- Pockets
- 17 · best druggability 0.82
Structure
1 distinct chain · 50% helix, 3% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Retinoblastoma-related protein 1 | protein | 1010 | 50% helix, 3% strand | A2YXJ7 |
Pockets
17 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1180 | 0.82 | 0.83 | 113 | empty |
| 2 | 538 | 0.73 | 0.82 | 51 | empty |
| 3 | 102 | 0.69 | 0.92 | 18 | empty |
| 4 | 171 | 0.63 | 0.84 | 32 | empty |
| 5 | 170 | 0.53 | 0.79 | 35 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A2YXJ7
- Elsewhere: UniProt A2YXJ7 · AlphaFold DB A2YXJ7
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