Research workbench

AlphaFold monomer V2.0 prediction for rabenosyn-5 (Q9H1K0)

Analyse AlphaFold monomer V2.0 prediction for rabenosyn-5 (Q9H1K0) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: Q9H1K0
Type: protein
Length: 784 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x2CfD32b173ecf9861B5DB5dFF2452f89E7bCADff
Molecule: Rabenosyn-5
UniProt: Q9H1K0
Pockets: 6 · best druggability 0.49

Structure

1 distinct chain · 46% helix, 2% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Rabenosyn-5	protein	784	46% helix, 2% strand	Q9H1K0

Pockets

6 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	218	0.49	0.75	26	empty
2	164	0.43	0.74	20	empty
3	87	0.41	0.78	16	empty
4	83	0.35	0.75	12	empty
5	57	0.30	0.75	10	empty

Compared structures

1YZM · Structure of Rabenosyn (458-503), Rab4 binding domain · an experimental structure of the same protein · chain A against A, TM-score 0.06
1YZM · Structure of rabenosyn (458-503), RAB4 binding domain · an experimental structure of the same protein · chain A against A, TM-score 0.06

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9H1K0
Elsewhere: UniProt Q9H1K0 · AlphaFold DB Q9H1K0

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