Research workbench
AlphaFold monomer V2.0 prediction for RNA-binding protein 12 (Q9NTZ6)
Analyse AlphaFold monomer V2.0 prediction for RNA-binding protein 12 (Q9NTZ6) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q9NTZ6
- Type
- protein
- Length
- 932 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x362a6d063b1B7E1B6EfD3A9A7CA3612e3FE037AA
- Molecule
- RNA-binding protein 12
- UniProt
- Q9NTZ6
- Pockets
- 1 · best druggability 0.52
Structure
1 distinct chain · 15% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA-binding protein 12 | protein | 932 | 15% helix, 16% strand | Q9NTZ6 |
Pockets
1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 244 | 0.52 | 0.76 | 32 | empty |
Compared structures
- 1WEL · Solution structure of RNA binding domain in NP_006038 · an experimental structure of the same protein · chain A against A, TM-score 0.11
- 1WEL · Solution structure of RNA binding domain in NP_006038 · an experimental structure of the same protein · chain A against A, TM-score 0.11
- 2CPY · Solution structure of RNA binding domain 3 in RNA binding motif protein 12 · an experimental structure of the same protein · chain A against A, TM-score 0.11
- 2CPY · solution structure of RNA binding domain 3 in RNA binding motif protein 12 · an experimental structure of the same protein · chain A against A, TM-score 0.11
- 2DNN · Solution structure of RNA binding domain in RNA-binding protein 12 · an experimental structure of the same protein · chain A against A, TM-score 0.10
- 2DNN · Solution structure of RNA binding domain in RNA-binding protein 12 · an experimental structure of the same protein · chain A against A, TM-score 0.10
- 2EK1 · Crystal structure of RNA-binding motif of human rna-binding protein 12 · an experimental structure of the same protein · chain A against D, TM-score 0.08
- 2EK1 · Crystal structure of RNA-binding motif of human RNA-binding protein 12 · an experimental structure of the same protein · chain A against D, TM-score 0.08
- 2EK6 · Crystal structure of human RNA-binding protein 12 · an experimental structure of the same protein · chain A against A, TM-score 0.08
- 2EK6 · Crystal structure of Human RNA-Binding Protein 12 · an experimental structure of the same protein · chain A against A, TM-score 0.08
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9NTZ6
- Elsewhere: UniProt Q9NTZ6 · AlphaFold DB Q9NTZ6
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