Research workbench
AlphaFold monomer V2.0 prediction for rhomboid-like protein 1 (Q0WQX7)
Analyse AlphaFold monomer V2.0 prediction for rhomboid-like protein 1 (Q0WQX7) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q0WQX7
- Type
- protein
- Length
- 389 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xf87a97E0A4bB354D834857B14296240B167cbe70
- Molecule
- Rhomboid-like protein 1
- UniProt
- Q0WQX7
- Pockets
- 6 · best druggability 0.74
Structure
1 distinct chain · 56% helix, 6% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Rhomboid-like protein 1 | protein | 389 | 56% helix, 6% strand | Q0WQX7 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 735 | 0.74 | 0.79 | 79 | empty |
| 2 | 303 | 0.66 | 0.81 | 34 | empty |
| 3 | 183 | 0.62 | 0.83 | 24 | empty |
| 4 | 84 | 0.41 | 0.79 | 19 | empty |
| 5 | 85 | 0.37 | 0.76 | 14 | empty |
Modifications
Observed in the structure: 5 disulfide (disulfide).
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q0WQX7
- Elsewhere: UniProt Q0WQX7 · AlphaFold DB Q0WQX7
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