Research workbench
AlphaFold monomer V2.0 prediction for ribosome biogenesis GTPase a (D5DJL5)
Analyse AlphaFold monomer V2.0 prediction for ribosome biogenesis GTPase a (D5DJL5) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- D5DJL5
- Type
- protein
- Length
- 288 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7a1388B6Aad67B04634A32f63b8A6D6005eab86c
- Molecule
- Ribosome biogenesis GTPase a
- UniProt
- D5DJL5
- Pockets
- 3 · best druggability 0.61
Structure
1 distinct chain · 45% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ribosome biogenesis GTPase a | protein | 288 | 45% helix, 14% strand | D5DJL5 |
Pockets
3 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 246 | 0.61 | 0.81 | 40 | empty |
| 2 | 218 | 0.55 | 0.78 | 26 | empty |
| 3 | 128 | 0.48 | 0.78 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt D5DJL5
- Elsewhere: UniProt D5DJL5 · AlphaFold DB D5DJL5
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