Research workbench
AlphaFold monomer V2.0 prediction for rab GTPase-activating protein 1-like (Q5ZJ17)
Analyse AlphaFold monomer V2.0 prediction for rab GTPase-activating protein 1-like… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q5ZJ17
- Type
- protein
- Length
- 816 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x0a7904E17cd267e2b1BB3805b86763D97C12ff87
- Molecule
- Rab GTPase-activating protein 1-like
- UniProt
- Q5ZJ17
- Pockets
- 8 · best druggability 0.69
Structure
1 distinct chain · 36% helix, 19% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Rab GTPase-activating protein 1-like | protein | 816 | 36% helix, 19% strand | Q5ZJ17 |
Pockets
8 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 713 | 0.69 | 0.77 | 73 | empty |
| 2 | 124 | 0.61 | 0.86 | 21 | empty |
| 3 | 198 | 0.57 | 0.80 | 27 | empty |
| 4 | 209 | 0.54 | 0.78 | 32 | empty |
| 5 | 268 | 0.53 | 0.75 | 29 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5ZJ17
- Elsewhere: UniProt Q5ZJ17 · AlphaFold DB Q5ZJ17
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