Research workbench

AlphaFold monomer V2.0 prediction for retinoic acid receptor beta (P22605)

Analyse AlphaFold monomer V2.0 prediction for retinoic acid receptor beta (P22605) in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

Accession: P22605
Type: protein
Length: 482 residues
Chains: 1
Collection: MolNFT v1 / AlphaFold
Contract: 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
Owner: 0x0410a81A4eBc9e5bc9dD9D5a9718D5FfE2c316Da
Molecule: Retinoic acid receptor beta
UniProt: P22605
Pockets: 5 · best druggability 0.80

Structure

1 distinct chain · 38% helix, 3% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Retinoic acid receptor beta	protein	482	38% helix, 3% strand	P22605

Pockets

5 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	177	0.80	0.95	31	empty
2	286	0.54	0.76	35	empty
3	261	0.53	0.76	22	empty
4	252	0.53	0.76	32	empty
5	104	0.37	0.74	16	empty

Compared structures

1XDK · Crystal Structure of the RARbeta/RXRalpha Ligand Binding Domain Heterodimer in Complex… · an experimental structure of the same protein · chain A against B, TM-score 0.49
1XDK · Crystal structure of the RARBETA/RXRALPHA ligand binding domain heterodimer in complex… · an experimental structure of the same protein · chain A against B, TM-score 0.49

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P22605
Elsewhere: UniProt P22605 · AlphaFold DB P22605

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.