Research workbench
AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (B2K4B3)
Analyse AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B2K4B3
- Type
- protein
- Length
- 968 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xd10960F956646DE8b64d3598984c91C2d5Af3D7b
- Molecule
- RNA polymerase-associated protein rapa
- UniProt
- B2K4B3
- Pockets
- 7 · best druggability 0.82
Structure
1 distinct chain · 47% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase-associated protein rapa | protein | 968 | 47% helix, 18% strand | B2K4B3 |
Pockets
7 pockets found on a 1 Å grid, 5 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 808 | 0.82 | 0.85 | 90 | empty |
| 2 | 958 | 0.79 | 0.81 | 80 | empty |
| 3 | 482 | 0.68 | 0.79 | 52 | empty |
| 4 | 497 | 0.62 | 0.75 | 46 | empty |
| 5 | 214 | 0.54 | 0.78 | 26 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B2K4B3
- Elsewhere: UniProt B2K4B3 · AlphaFold DB B2K4B3
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