Research workbench
AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (Q7MHE6)
Analyse AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q7MHE6
- Type
- protein
- Length
- 969 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x7c75F0f7d6d136A2b8D4C6C6e9b3D8a697949DF1
- Molecule
- RNA polymerase-associated protein rapa
- UniProt
- Q7MHE6
- Pockets
- 14 · best druggability 0.79
Structure
1 distinct chain · 47% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase-associated protein rapa | protein | 969 | 47% helix, 18% strand | Q7MHE6 |
Pockets
14 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 821 | 0.79 | 0.83 | 94 | empty |
| 2 | 782 | 0.74 | 0.79 | 79 | empty |
| 3 | 55 | 0.66 | 0.96 | 17 | empty |
| 4 | 352 | 0.55 | 0.74 | 48 | empty |
| 5 | 180 | 0.52 | 0.78 | 20 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q7MHE6
- Elsewhere: UniProt Q7MHE6 · AlphaFold DB Q7MHE6
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