Research workbench
AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (A5F5C5)
Analyse AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A5F5C5
- Type
- protein
- Length
- 969 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x69eE01C8f0EE6680BfD1adfA715C501Aba23F4B9
- Molecule
- RNA polymerase-associated protein rapa
- UniProt
- A5F5C5
- Pockets
- 8 · best druggability 0.79
Structure
1 distinct chain · 47% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase-associated protein rapa | protein | 969 | 47% helix, 18% strand | A5F5C5 |
Pockets
8 pockets found on a 1 Å grid, 4 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 806 | 0.79 | 0.82 | 78 | empty |
| 2 | 703 | 0.77 | 0.82 | 70 | empty |
| 3 | 893 | 0.70 | 0.75 | 109 | empty |
| 4 | 328 | 0.60 | 0.77 | 48 | empty |
| 5 | 81 | 0.49 | 0.83 | 24 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A5F5C5
- Elsewhere: UniProt A5F5C5 · AlphaFold DB A5F5C5
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