Research workbench
AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (Q32K36)
Analyse AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q32K36
- Type
- protein
- Length
- 968 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x50c90613725017760519048B947c72787082125b
- Molecule
- RNA polymerase-associated protein rapa
- UniProt
- Q32K36
- Pockets
- 8 · best druggability 0.83
Structure
1 distinct chain · 48% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase-associated protein rapa | protein | 968 | 48% helix, 18% strand | Q32K36 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 808 | 0.83 | 0.85 | 95 | empty |
| 2 | 1020 | 0.79 | 0.81 | 105 | empty |
| 3 | 241 | 0.59 | 0.79 | 36 | empty |
| 4 | 180 | 0.48 | 0.76 | 26 | empty |
| 5 | 64 | 0.33 | 0.76 | 13 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q32K36
- Elsewhere: UniProt Q32K36 · AlphaFold DB Q32K36
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