Research workbench
AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (Q326H6)
Analyse AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q326H6
- Type
- protein
- Length
- 968 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x758850a3D7646b829972912E8A512268C74ceb66
- Molecule
- RNA polymerase-associated protein rapa
- UniProt
- Q326H6
- Pockets
- 8 · best druggability 0.84
Structure
1 distinct chain · 47% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase-associated protein rapa | protein | 968 | 47% helix, 18% strand | Q326H6 |
Pockets
8 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1075 | 0.84 | 0.85 | 119 | empty |
| 2 | 1049 | 0.81 | 0.83 | 94 | empty |
| 3 | 403 | 0.73 | 0.84 | 46 | empty |
| 4 | 82 | 0.50 | 0.83 | 26 | empty |
| 5 | 192 | 0.45 | 0.74 | 28 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q326H6
- Elsewhere: UniProt Q326H6 · AlphaFold DB Q326H6
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