Research workbench
AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (A8FQW4)
Analyse AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A8FQW4
- Type
- protein
- Length
- 968 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x9F605311B7e26e76340423EfAfbE5e2EFc7A0b7C
- Molecule
- RNA polymerase-associated protein rapa
- UniProt
- A8FQW4
- Pockets
- 13 · best druggability 0.80
Structure
1 distinct chain · 48% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase-associated protein rapa | protein | 968 | 48% helix, 18% strand | A8FQW4 |
Pockets
13 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 1127 | 0.80 | 0.81 | 86 | empty |
| 2 | 626 | 0.78 | 0.84 | 84 | empty |
| 3 | 408 | 0.66 | 0.80 | 41 | empty |
| 4 | 227 | 0.59 | 0.80 | 31 | empty |
| 5 | 166 | 0.56 | 0.81 | 27 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A8FQW4
- Elsewhere: UniProt A8FQW4 · AlphaFold DB A8FQW4
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