Research workbench
AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (B8CIB4)
Analyse AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- B8CIB4
- Type
- protein
- Length
- 968 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xB35df660264f41795De49C83276C108A4ba91ADE
- Molecule
- RNA polymerase-associated protein rapa
- UniProt
- B8CIB4
- Pockets
- 13 · best druggability 0.80
Structure
1 distinct chain · 47% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase-associated protein rapa | protein | 968 | 47% helix, 18% strand | B8CIB4 |
Pockets
13 pockets found on a 1 Å grid, 6 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 565 | 0.80 | 0.86 | 70 | empty |
| 2 | 573 | 0.74 | 0.81 | 46 | empty |
| 3 | 526 | 0.71 | 0.80 | 60 | empty |
| 4 | 160 | 0.70 | 0.90 | 32 | empty |
| 5 | 204 | 0.57 | 0.80 | 29 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt B8CIB4
- Elsewhere: UniProt B8CIB4 · AlphaFold DB B8CIB4
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