Research workbench
AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (A4YAN1)
Analyse AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A4YAN1
- Type
- protein
- Length
- 968 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0x5c4adF1416281C09AE8eE1cbb80fF7e44cE86F97
- Molecule
- RNA polymerase-associated protein rapa
- UniProt
- A4YAN1
- Pockets
- 17 · best druggability 0.73
Structure
1 distinct chain · 48% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase-associated protein rapa | protein | 968 | 48% helix, 18% strand | A4YAN1 |
Pockets
17 pockets found on a 1 Å grid, 9 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 571 | 0.73 | 0.81 | 49 | empty |
| 2 | 555 | 0.66 | 0.76 | 57 | empty |
| 3 | 56 | 0.64 | 0.94 | 19 | empty |
| 4 | 219 | 0.63 | 0.83 | 29 | empty |
| 5 | 399 | 0.62 | 0.77 | 41 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A4YAN1
- Elsewhere: UniProt A4YAN1 · AlphaFold DB A4YAN1
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