Research workbench
AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (Q8EJ93)
Analyse AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- Q8EJ93
- Type
- protein
- Length
- 968 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xc0F878C3f3E2a1874e2A6daC80d429e553DdB0D5
- Molecule
- RNA polymerase-associated protein rapa
- UniProt
- Q8EJ93
- Pockets
- 15 · best druggability 0.79
Structure
1 distinct chain · 48% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase-associated protein rapa | protein | 968 | 48% helix, 18% strand | Q8EJ93 |
Pockets
15 pockets found on a 1 Å grid, 7 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 703 | 0.79 | 0.83 | 74 | empty |
| 2 | 165 | 0.75 | 0.93 | 30 | empty |
| 3 | 797 | 0.73 | 0.78 | 49 | empty |
| 4 | 376 | 0.67 | 0.81 | 44 | empty |
| 5 | 236 | 0.61 | 0.81 | 33 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8EJ93
- Elsewhere: UniProt Q8EJ93 · AlphaFold DB Q8EJ93
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