Research workbench
AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa (A6WSX5)
Analyse AlphaFold monomer V2.0 prediction for RNA polymerase-associated protein rapa… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- Accession
- A6WSX5
- Type
- protein
- Length
- 968 residues
- Chains
- 1
- Collection
- MolNFT v1 / AlphaFold
- Contract
- 0xBf7491af3407816DFa88a5EA4c82e8A2B1D721eD
- Owner
- 0xb4D2d9c96b0D792d0b77e7147D724cc1F801ae58
- Molecule
- RNA polymerase-associated protein rapa
- UniProt
- A6WSX5
- Pockets
- 16 · best druggability 0.75
Structure
1 distinct chain · 48% helix, 18% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | RNA polymerase-associated protein rapa | protein | 968 | 48% helix, 18% strand | A6WSX5 |
Pockets
16 pockets found on a 1 Å grid, 8 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 601 | 0.75 | 0.82 | 54 | empty |
| 2 | 244 | 0.66 | 0.83 | 34 | empty |
| 3 | 499 | 0.65 | 0.77 | 55 | empty |
| 4 | 328 | 0.64 | 0.80 | 37 | empty |
| 5 | 135 | 0.61 | 0.86 | 28 | empty |
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A6WSX5
- Elsewhere: UniProt A6WSX5 · AlphaFold DB A6WSX5
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